Why Is My Navien Flow Sensor Acting Up? Troubleshooting Tips

The Navien flow sensor is a crucial component in their line of condensing tankless water heaters, responsible for detecting water flow and triggering the activation of the heating process. When this sensor malfunctions, it can lead to various issues, including sudden temperature drops, inadequate hot water supply, or even complete system failure. Troubleshooting these problems is essential to maintain the efficiency and reliability of your Navien water heater.
Understanding the Navien Flow Sensor and Its Functionality

The flow sensor in Navien water heaters is designed to measure the rate of water flow through the unit. It is a critical component in the operation of the heater, as it ensures that the unit only fires up when there is a demand for hot water. This sensor works in conjunction with other components, such as the gas valve and the control board, to regulate the heating process and maintain a consistent water temperature.
Navien flow sensors are typically equipped with a magnetic paddle or a small turbine that rotates as water passes through the sensor. This rotation is then converted into an electrical signal, which is sent to the control board. The control board interprets this signal to determine the water flow rate and make adjustments accordingly. This feedback loop ensures that the water heater operates efficiently and provides a steady supply of hot water.
Common Issues with the Navien Flow Sensor
While the Navien flow sensor is designed for reliability, several factors can contribute to its malfunction. Here are some of the most common issues users may encounter:
- Debris or mineral buildup: Over time, mineral deposits and debris can accumulate inside the flow sensor, hindering its ability to rotate freely and accurately measure water flow.
- Corrosion: In areas with hard water or high mineral content, the flow sensor can corrode, leading to inaccurate readings or complete failure.
- Wear and tear: Like any mechanical component, the flow sensor can experience wear and tear over time, especially if the water heater is frequently used or if the water flow is consistently high.
- Electrical issues: In some cases, the electrical components of the flow sensor may malfunction, leading to incorrect readings or no readings at all.
- Control board issues: The control board, which receives signals from the flow sensor, can also malfunction, leading to incorrect interpretations of the flow rate.
Troubleshooting Tips for Navien Flow Sensor Malfunctions

If you’re experiencing issues with your Navien water heater, particularly sudden temperature drops or inadequate hot water supply, the flow sensor could be the culprit. Here are some troubleshooting steps to help you identify and resolve the problem:
1. Check for Clogged or Restricted Water Flow
One of the most common causes of flow sensor issues is restricted water flow. This can occur due to mineral buildup, debris, or even a kinked supply line. To troubleshoot this problem:
- Locate the water inlet filter, which is typically located on the front of the water heater.
- Remove the filter and inspect it for any signs of debris or mineral buildup. If you find any, clean or replace the filter as necessary.
- Check the supply lines for any kinks or restrictions. Ensure that the lines are straight and free of any obstructions.
- If the filter and supply lines appear clear, try flushing the system to remove any debris that may be affecting the flow sensor.
2. Inspect for Mineral Buildup or Corrosion
Mineral buildup and corrosion are common issues in areas with hard water. These deposits can accumulate on the flow sensor, affecting its performance. To address this:
- Turn off the water supply to the water heater and ensure that the power is also turned off.
- Locate the flow sensor, which is typically located near the water inlet. It may be covered by a small access panel.
- Carefully remove the flow sensor and inspect it for any signs of mineral buildup or corrosion. Use a soft brush or a mild cleaning solution to gently clean the sensor if necessary.
- Reinstall the flow sensor and turn the water and power back on. Monitor the water heater's performance to see if the issue has been resolved.
3. Check the Electrical Connections
Electrical issues can also cause flow sensor malfunctions. Loose or corroded connections can disrupt the flow of electrical signals, leading to inaccurate readings or complete sensor failure. To troubleshoot this:
- Locate the electrical connections to the flow sensor. These are typically located near the sensor itself or on the control board.
- Ensure that all connections are tight and secure. If necessary, clean the connections with a mild electrical contact cleaner to remove any corrosion or oxidation.
- Check the wiring for any signs of damage or fraying. If you notice any issues, replace the wiring as needed.
- If the electrical connections appear to be in good condition, the issue may lie with the control board. In this case, it's best to consult a professional for further diagnosis and repair.
4. Test the Control Board
If the flow sensor and its electrical connections appear to be functioning correctly, the problem may lie with the control board. The control board is responsible for interpreting the signals from the flow sensor and making adjustments to the heating process. To test the control board:
- Locate the control board, which is typically located inside the water heater's control panel.
- Use a multimeter to test the voltage and resistance of the control board's components, including the flow sensor input and output.
- Compare the readings with the manufacturer's specifications. If there are significant deviations, the control board may need to be replaced.
- If you're unsure about testing the control board or interpreting the results, it's best to seek professional assistance to avoid further damage.
Preventative Maintenance and Longevity

Regular maintenance is key to ensuring the longevity and efficient operation of your Navien water heater. Here are some preventative measures you can take to minimize flow sensor issues:
- Filter Maintenance: Regularly inspect and clean or replace the water inlet filter to prevent debris and mineral buildup from affecting the flow sensor.
- Water Softening: If you live in an area with hard water, consider installing a water softener to reduce mineral deposits and corrosion.
- Annual Servicing: Schedule annual maintenance checks with a qualified technician to inspect and clean the flow sensor and other critical components.
- Monitor Water Usage: Keep an eye on your water usage patterns. Sudden increases in water flow can put additional strain on the flow sensor and other components.
Professional Assistance
While many flow sensor issues can be resolved with basic troubleshooting, some problems may require more advanced diagnostics and repairs. If you’re unable to identify or resolve the issue, it’s best to consult a professional HVAC technician or a Navien-authorized service provider. They have the expertise and tools to accurately diagnose and repair complex issues with your water heater.
Can I replace the flow sensor myself?
+While replacing a flow sensor is not an overly complex task, it does require some technical knowledge and access to specialized tools. Additionally, working with gas-powered appliances like Navien water heaters can be dangerous if not handled properly. It’s generally recommended to leave sensor replacement to a qualified technician or a Navien-authorized service provider to ensure the job is done safely and correctly.
How often should I clean or replace the flow sensor?
+The frequency of cleaning or replacing the flow sensor depends on several factors, including water quality, usage patterns, and the age of the water heater. As a general guideline, it’s recommended to clean the sensor annually and replace it every 5-7 years. However, if you notice any issues with your water heater’s performance, such as sudden temperature drops or inadequate hot water supply, it’s a good idea to inspect the flow sensor sooner rather than later.
What are the signs of a malfunctioning flow sensor?
+Some common signs of a malfunctioning flow sensor include sudden temperature drops, inadequate hot water supply, and complete system failure. You may also notice that the water heater takes longer to heat up or that the water temperature fluctuates erratically. In some cases, you may even hear unusual noises coming from the water heater, indicating a potential issue with the flow sensor or other components.